CDS

Accession Number TCMCG042C78186
gbkey CDS
Protein Id XP_016510322.1
Location join(17573..17778,18905..18973,20028..20116,21613..21659,21756..21836,21938..22103,22185..22419,22494..22559,23002..23118,23458..23524,23636..23673,23791..23851)
Gene LOC107827654
GeneID 107827654
Organism Nicotiana tabacum

Protein

Length 413aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016654836.1
Definition PREDICTED: serine/arginine-rich splicing factor SR45-like [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category A
Description RNA recognition motif
KEGG_TC -
KEGG_Module M00430        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14325        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
ko03015        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009743        [VIEW IN EMBL-EBI]
GO:0009756        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010182        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071322        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGAAACCAGGCCGAGGCCGTGCGGCTTCACCGTCAGGCTCGTCTTCTCGTTCTCCGTCGCGGTCTCGTTCTCGCTCTCGCTCTTACTCTTCTCGTTCCTCGAGTTCTCGATCTAGATCCCGCTCCAGATCGTTTTCTTCCTCCTCCTCCAGTGGCAGTTCTCGCAGCCCTAGCCCCCGCCCTCCTCCTTCTCAGCGAAAAAGCCCTGCTGGAGTATCTAAGCGAGGCCGTTCACCGCTGCCACTATCTAAGAAAGCTTCTCCACCTCCAAGGAAAGTCTCTCCAACTCCTGAGTCACGTGTGCTTCATGTGGATCAGCTCAGCAGGAATGTCAATGAAAACCATCTGAAAGAAATATTTGGTAATTTTGGTGAAATTCTGCACGTGCAGTTGGTCATTGATCATGTTGTTAACCTTCCAAAAGGGTTTGCTTATGTTGAGTTCAAGACTAGAATTGATGCTGAGAAAGCCCAACTACACATGGATGGTGCACAAATTGATGGGAAAATAGTTCATGCTAAGTTCACCCTGCCAGAGAGGAAAAAGGCTCCCTCACCTCCAAGGGCTGCTGCAACTTCCTCAAGGAGAGATGCTCCAAGAACTGATAATGCCCCTGTTGATTTGGAGAAAGATGGACCAAAACGGCAACAAGAGTTATCTCCTCGTCGAAAACCTGTCTCTCCACCTCGAAGGTCTCCTATAGGACGAAGAGGATCTCCTAGACGTGAGCCAGATTCTCCTGCCCGTCGACGTGCCGAGTCTCCTATTCGTCGTCGCGCAGGTTCTCCTTATAGGCGCGGCAGTCCACCGGCCCCAAGGAGGAGGCCTGCATCTCCCATTAGACGACGTTCACCATCCTCTCCACCAAGACGTTATCGAACACCTCCTAGGGGCTCTCCCAGAAGAATTCGTGGCAGTCCTGTTCGAAGACGTTCTCCCCTTCCGCCAAGGCGACGTTCTCCACCGCGACGTGCTAGAAGTCCACCCAGAAGATCTCCGGTTGGTCGCCGGTCTAGCCGCTCACCTATTAGGAGACCTATCCGTTCACGATCAAGATCCATCTCTCCTAGGCGGGGAAGGGTTCCAGCCACAAGACGTGGGAGGTCATCATCCTACTCTTCTTCTCCCAGTCCTCGAAAGGCACCCCGCAGGATTTCAAGGAGTCGTAGTCCTAGAAAGCCTTTAAGAGGGAGGAGCCCCAGCAACAGTGACAGCAGCAGTTCGCCTCGTAAGCCCTAA
Protein:  
MAKPGRGRAASPSGSSSRSPSRSRSRSRSYSSRSSSSRSRSRSRSFSSSSSSGSSRSPSPRPPPSQRKSPAGVSKRGRSPLPLSKKASPPPRKVSPTPESRVLHVDQLSRNVNENHLKEIFGNFGEILHVQLVIDHVVNLPKGFAYVEFKTRIDAEKAQLHMDGAQIDGKIVHAKFTLPERKKAPSPPRAAATSSRRDAPRTDNAPVDLEKDGPKRQQELSPRRKPVSPPRRSPIGRRGSPRREPDSPARRRAESPIRRRAGSPYRRGSPPAPRRRPASPIRRRSPSSPPRRYRTPPRGSPRRIRGSPVRRRSPLPPRRRSPPRRARSPPRRSPVGRRSSRSPIRRPIRSRSRSISPRRGRVPATRRGRSSSYSSSPSPRKAPRRISRSRSPRKPLRGRSPSNSDSSSSPRKP